Last updated on 2024-10-16 03:49:30 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.2.4 | 10.66 | 320.31 | 330.97 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.2.4 | 7.51 | 184.32 | 191.83 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.2.4 | 495.29 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.2.4 | 508.28 | ERROR | |||
| r-devel-windows-x86_64 | 0.2.4 | 14.00 | 282.00 | 296.00 | ERROR | |
| r-patched-linux-x86_64 | 0.2.4 | 11.03 | 303.79 | 314.82 | OK | |
| r-release-linux-x86_64 | 0.2.4 | 9.57 | 303.32 | 312.89 | OK | |
| r-release-macos-arm64 | 0.2.4 | 133.00 | OK | |||
| r-release-macos-x86_64 | 0.2.4 | 243.00 | OK | |||
| r-release-windows-x86_64 | 0.2.4 | 14.00 | 291.00 | 305.00 | ERROR | |
| r-oldrel-macos-arm64 | 0.2.4 | 155.00 | OK | |||
| r-oldrel-macos-x86_64 | 0.2.4 | 356.00 | OK | |||
| r-oldrel-windows-x86_64 | 0.2.4 | 16.00 | 370.00 | 386.00 | ERROR |
Version: 0.2.4
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-1.png
672x240 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19052 bytes
Input file size = 19154 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912
Output IDAT size = 14912 bytes (4140 bytes decrease)
Output file size = 14990 bytes (4164 bytes = 21.74% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-2.png
672x240 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33676 bytes
Input file size = 33802 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26019
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26019
Output IDAT size = 26019 bytes (7657 bytes decrease)
Output file size = 26097 bytes (7705 bytes = 22.79% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-11-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31267 bytes
Input file size = 31381 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404
Output IDAT size = 25404 bytes (5863 bytes decrease)
Output file size = 25482 bytes (5899 bytes = 18.80% decrease)
--- finished re-building ‘consistencychecking-3.Rmd’
--- re-building ‘dataexploration-1.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-1-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19072 bytes
Input file size = 19174 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320
Output IDAT size = 16320 bytes (2752 bytes decrease)
Output file size = 16398 bytes (2776 bytes = 14.48% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 119981 bytes
Input file size = 120227 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771
Output IDAT size = 88771 bytes (31210 bytes decrease)
Output file size = 88849 bytes (31378 bytes = 26.10% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 25739 bytes
Input file size = 25853 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919
Output IDAT size = 19919 bytes (5820 bytes decrease)
Output file size = 19997 bytes (5856 bytes = 22.65% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 131032 bytes
Input file size = 131290 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428
Output IDAT size = 94428 bytes (36604 bytes decrease)
Output file size = 94506 bytes (36784 bytes = 28.02% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.time-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 79747 bytes
Input file size = 79933 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57953
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57953
Output IDAT size = 57953 bytes (21794 bytes decrease)
Output file size = 58031 bytes (21902 bytes = 27.40% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/obese.time-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 64122 bytes
Input file size = 64284 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061
Output IDAT size = 45061 bytes (19061 bytes decrease)
Output file size = 45139 bytes (19145 bytes = 29.78% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.binplot-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 89294 bytes
Input file size = 89492 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66632
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66632
Output IDAT size = 66632 bytes (22662 bytes decrease)
Output file size = 66710 bytes (22782 bytes = 25.46% decrease)
--- finished re-building ‘dataexploration-1.Rmd’
--- re-building ‘mbnmatime-overview.Rmd’ using rmarkdown
--- finished re-building ‘mbnmatime-overview.Rmd’
--- re-building ‘outputs-4.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 92027 bytes
Input file size = 92237 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66655
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66655
Output IDAT size = 66655 bytes (25372 bytes decrease)
Output file size = 66733 bytes (25504 bytes = 27.65% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-7-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 20434 bytes
Input file size = 20536 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17133
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17133
Output IDAT size = 17133 bytes (3301 bytes decrease)
Output file size = 17211 bytes (3325 bytes = 16.19% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-12-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 56265 bytes
Input file size = 56415 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 40716
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 40716
Output IDAT size = 40716 bytes (15549 bytes decrease)
Output file size = 40794 bytes (15621 bytes = 27.69% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-13-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 81662 bytes
Input file size = 81848 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 61899
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 61899
Output IDAT size = 61899 bytes (19763 bytes decrease)
Output file size = 61977 bytes (19871 bytes = 24.28% decrease)
--- finished re-building ‘outputs-4.Rmd’
--- re-building ‘predictions-5.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 67109 bytes
Input file size = 67283 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53226
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53226
Output IDAT size = 53226 bytes (13883 bytes decrease)
Output file size = 53304 bytes (13979 bytes = 20.78% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
672x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31292 bytes
Input file size = 31406 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24188
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24188
Output IDAT size = 24188 bytes (7104 bytes decrease)
Output file size = 24266 bytes (7140 bytes = 22.73% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 75793 bytes
Input file size = 75979 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 58805
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 58805
Output IDAT size = 58805 bytes (16988 bytes decrease)
Output file size = 58883 bytes (17096 bytes = 22.50% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 54276 bytes
Input file size = 54426 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 40828
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 40828
Output IDAT size = 40828 bytes (13448 bytes decrease)
Output file size = 40906 bytes (13520 bytes = 24.84% decrease)
--- finished re-building ‘predictions-5.Rmd’
--- re-building ‘runmbnmatime-2.Rmd’ using rmarkdown
Quitting from lines 122-123 [unnamed-chunk-3] (runmbnmatime-2.Rmd)
Error: processing vignette 'runmbnmatime-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘runmbnmatime-2.Rmd’
SUMMARY: processing the following file failed:
‘runmbnmatime-2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.2.4
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-1.png
672x240 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19052 bytes
Input file size = 19154 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912
Output IDAT size = 14912 bytes (4140 bytes decrease)
Output file size = 14990 bytes (4164 bytes = 21.74% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-2.png
672x240 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33681 bytes
Input file size = 33807 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26014
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26014
Output IDAT size = 26014 bytes (7667 bytes decrease)
Output file size = 26092 bytes (7715 bytes = 22.82% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-11-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31267 bytes
Input file size = 31381 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404
Output IDAT size = 25404 bytes (5863 bytes decrease)
Output file size = 25482 bytes (5899 bytes = 18.80% decrease)
--- finished re-building ‘consistencychecking-3.Rmd’
--- re-building ‘dataexploration-1.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-1-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19072 bytes
Input file size = 19174 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320
Output IDAT size = 16320 bytes (2752 bytes decrease)
Output file size = 16398 bytes (2776 bytes = 14.48% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 119981 bytes
Input file size = 120227 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771
Output IDAT size = 88771 bytes (31210 bytes decrease)
Output file size = 88849 bytes (31378 bytes = 26.10% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 25739 bytes
Input file size = 25853 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919
Output IDAT size = 19919 bytes (5820 bytes decrease)
Output file size = 19997 bytes (5856 bytes = 22.65% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 131032 bytes
Input file size = 131290 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428
Output IDAT size = 94428 bytes (36604 bytes decrease)
Output file size = 94506 bytes (36784 bytes = 28.02% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.time-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 79749 bytes
Input file size = 79935 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57952
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57952
Output IDAT size = 57952 bytes (21797 bytes decrease)
Output file size = 58030 bytes (21905 bytes = 27.40% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/obese.time-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 64122 bytes
Input file size = 64284 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061
Output IDAT size = 45061 bytes (19061 bytes decrease)
Output file size = 45139 bytes (19145 bytes = 29.78% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.binplot-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 89553 bytes
Input file size = 89751 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66922
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66922
Output IDAT size = 66922 bytes (22631 bytes decrease)
Output file size = 67000 bytes (22751 bytes = 25.35% decrease)
--- finished re-building ‘dataexploration-1.Rmd’
--- re-building ‘mbnmatime-overview.Rmd’ using rmarkdown
--- finished re-building ‘mbnmatime-overview.Rmd’
--- re-building ‘outputs-4.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 92000 bytes
Input file size = 92210 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66445
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66445
Output IDAT size = 66445 bytes (25555 bytes decrease)
Output file size = 66523 bytes (25687 bytes = 27.86% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-7-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19469 bytes
Input file size = 19571 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16572
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16572
Output IDAT size = 16572 bytes (2897 bytes decrease)
Output file size = 16650 bytes (2921 bytes = 14.93% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-12-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 57741 bytes
Input file size = 57903 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 41369
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 41369
Output IDAT size = 41369 bytes (16372 bytes decrease)
Output file size = 41447 bytes (16456 bytes = 28.42% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-13-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 81538 bytes
Input file size = 81724 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 61822
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 61822
Output IDAT size = 61822 bytes (19716 bytes decrease)
Output file size = 61900 bytes (19824 bytes = 24.26% decrease)
--- finished re-building ‘outputs-4.Rmd’
--- re-building ‘predictions-5.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 67173 bytes
Input file size = 67347 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 52863
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 52863
Output IDAT size = 52863 bytes (14310 bytes decrease)
Output file size = 52941 bytes (14406 bytes = 21.39% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
672x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31204 bytes
Input file size = 31318 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24203
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24203
Output IDAT size = 24203 bytes (7001 bytes decrease)
Output file size = 24281 bytes (7037 bytes = 22.47% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 74965 bytes
Input file size = 75151 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57867
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57867
Output IDAT size = 57867 bytes (17098 bytes decrease)
Output file size = 57945 bytes (17206 bytes = 22.90% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 52656 bytes
Input file size = 52806 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 39685
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 39685
Output IDAT size = 39685 bytes (12971 bytes decrease)
Output file size = 39763 bytes (13043 bytes = 24.70% decrease)
--- finished re-building ‘predictions-5.Rmd’
--- re-building ‘runmbnmatime-2.Rmd’ using rmarkdown
Quitting from lines 122-123 [unnamed-chunk-3] (runmbnmatime-2.Rmd)
Error: processing vignette 'runmbnmatime-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘runmbnmatime-2.Rmd’
SUMMARY: processing the following file failed:
‘runmbnmatime-2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.2.4
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-1.png
672x240 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19052 bytes
Input file size = 19154 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912
Output IDAT size = 14912 bytes (4140 bytes decrease)
Output file size = 14990 bytes (4164 bytes = 21.74% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-2.png
672x240 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33681 bytes
Input file size = 33807 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26014
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26014
Output IDAT size = 26014 bytes (7667 bytes decrease)
Output file size = 26092 bytes (7715 bytes = 22.82% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-11-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31267 bytes
Input file size = 31381 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404
Output IDAT size = 25404 bytes (5863 bytes decrease)
Output file size = 25482 bytes (5899 bytes = 18.80% decrease)
--- finished re-building ‘consistencychecking-3.Rmd’
--- re-building ‘dataexploration-1.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-1-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19072 bytes
Input file size = 19174 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320
Output IDAT size = 16320 bytes (2752 bytes decrease)
Output file size = 16398 bytes (2776 bytes = 14.48% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 119981 bytes
Input file size = 120227 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771
Output IDAT size = 88771 bytes (31210 bytes decrease)
Output file size = 88849 bytes (31378 bytes = 26.10% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 25739 bytes
Input file size = 25853 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919
Output IDAT size = 19919 bytes (5820 bytes decrease)
Output file size = 19997 bytes (5856 bytes = 22.65% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 131032 bytes
Input file size = 131290 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428
Output IDAT size = 94428 bytes (36604 bytes decrease)
Output file size = 94506 bytes (36784 bytes = 28.02% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.time-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 79749 bytes
Input file size = 79935 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57952
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57952
Output IDAT size = 57952 bytes (21797 bytes decrease)
Output file size = 58030 bytes (21905 bytes = 27.40% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/obese.time-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 64122 bytes
Input file size = 64284 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061
Output IDAT size = 45061 bytes (19061 bytes decrease)
Output file size = 45139 bytes (19145 bytes = 29.78% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.binplot-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 88168 bytes
Input file size = 88366 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 64945
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 64945
Output IDAT size = 64945 bytes (23223 bytes decrease)
Output file size = 65023 bytes (23343 bytes = 26.42% decrease)
--- finished re-building ‘dataexploration-1.Rmd’
--- re-building ‘mbnmatime-overview.Rmd’ using rmarkdown
--- finished re-building ‘mbnmatime-overview.Rmd’
--- re-building ‘outputs-4.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 92007 bytes
Input file size = 92217 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66419
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66419
Output IDAT size = 66419 bytes (25588 bytes decrease)
Output file size = 66497 bytes (25720 bytes = 27.89% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-7-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 20559 bytes
Input file size = 20661 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17312
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17312
Output IDAT size = 17312 bytes (3247 bytes decrease)
Output file size = 17390 bytes (3271 bytes = 15.83% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-12-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 59715 bytes
Input file size = 59877 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 43058
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 43058
Output IDAT size = 43058 bytes (16657 bytes decrease)
Output file size = 43136 bytes (16741 bytes = 27.96% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-13-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 81893 bytes
Input file size = 82079 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 62093
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 62093
Output IDAT size = 62093 bytes (19800 bytes decrease)
Output file size = 62171 bytes (19908 bytes = 24.25% decrease)
--- finished re-building ‘outputs-4.Rmd’
--- re-building ‘predictions-5.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 67016 bytes
Input file size = 67190 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 52718
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 52718
Output IDAT size = 52718 bytes (14298 bytes decrease)
Output file size = 52796 bytes (14394 bytes = 21.42% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
672x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31218 bytes
Input file size = 31332 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24179
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24179
Output IDAT size = 24179 bytes (7039 bytes decrease)
Output file size = 24257 bytes (7075 bytes = 22.58% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 75365 bytes
Input file size = 75551 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 58464
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 58464
Output IDAT size = 58464 bytes (16901 bytes decrease)
Output file size = 58542 bytes (17009 bytes = 22.51% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 50310 bytes
Input file size = 50460 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 38054
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 38054
Output IDAT size = 38054 bytes (12256 bytes decrease)
Output file size = 38132 bytes (12328 bytes = 24.43% decrease)
--- finished re-building ‘predictions-5.Rmd’
--- re-building ‘runmbnmatime-2.Rmd’ using rmarkdown
Quitting from lines 122-123 [unnamed-chunk-3] (runmbnmatime-2.Rmd)
Error: processing vignette 'runmbnmatime-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘runmbnmatime-2.Rmd’
SUMMARY: processing the following file failed:
‘runmbnmatime-2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.2.4
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'consistencychecking-3.Rmd' using rmarkdown
--- finished re-building 'consistencychecking-3.Rmd'
--- re-building 'dataexploration-1.Rmd' using rmarkdown
--- finished re-building 'dataexploration-1.Rmd'
--- re-building 'mbnmatime-overview.Rmd' using rmarkdown
--- finished re-building 'mbnmatime-overview.Rmd'
--- re-building 'outputs-4.Rmd' using rmarkdown
--- finished re-building 'outputs-4.Rmd'
--- re-building 'predictions-5.Rmd' using rmarkdown
--- finished re-building 'predictions-5.Rmd'
--- re-building 'runmbnmatime-2.Rmd' using rmarkdown
Quitting from lines 122-123 [unnamed-chunk-3] (runmbnmatime-2.Rmd)
Error: processing vignette 'runmbnmatime-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building 'runmbnmatime-2.Rmd'
SUMMARY: processing the following file failed:
'runmbnmatime-2.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64