CRAN Package Check Results for Package gggenomes

Last updated on 2024-07-17 15:56:26 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.0 10.85 316.28 327.13 OK
r-devel-linux-x86_64-debian-gcc 1.0.0 10.93 225.03 235.96 OK
r-devel-linux-x86_64-fedora-clang 1.0.0 406.39 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0.0 393.05 OK
r-devel-windows-x86_64 1.0.0 15.00 233.00 248.00 ERROR
r-patched-linux-x86_64 1.0.0 12.81 293.72 306.53 OK
r-release-linux-x86_64 1.0.0 9.20 304.81 314.01 OK
r-release-macos-arm64 1.0.0 125.00 OK
r-release-macos-x86_64 1.0.0 310.00 OK
r-release-windows-x86_64 1.0.0 15.00 277.00 292.00 OK
r-oldrel-macos-arm64 1.0.0 178.00 OK
r-oldrel-macos-x86_64 1.0.0 309.00 OK
r-oldrel-windows-x86_64 1.0.0 16.00 335.00 351.00 OK

Check Details

Version: 1.0.0
Check: Rd cross-references
Result: NOTE Undeclared package ‘ape’ in Rd xrefs Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.0.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building 'emales.Rmd' using rmarkdown --- finished re-building 'emales.Rmd' --- re-building 'flip.Rmd' using rmarkdown --- finished re-building 'flip.Rmd' --- re-building 'gggenomes.Rmd' using rmarkdown Quitting from lines 148-164 [unnamed-chunk-5] (gggenomes.Rmd) Error: processing vignette 'gggenomes.Rmd' failed with diagnostics: ℹ In index: 1. ℹ With name: PSSP7. Caused by error in `open.connection()`: ! cannot open the connection to 'ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/858/745/GCF_000858745.1_ViralProj15134/GCF_000858745.1_ViralProj15134_genomic.gff.gz' --- failed re-building 'gggenomes.Rmd' SUMMARY: processing the following file failed: 'gggenomes.Rmd' Error: Vignette re-building failed. Execution halted Flavor: r-devel-windows-x86_64