Last updated on 2024-06-30 03:55:16 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.12.0 | 11.84 | 538.46 | 550.30 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.12.0 | 9.01 | 383.84 | 392.85 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.0.0 | 780.50 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.12.0 | 240.48 | ERROR | |||
| r-devel-windows-x86_64 | 0.12.0 | 10.00 | 234.00 | 244.00 | OK | |
| r-patched-linux-x86_64 | 0.12.0 | 12.12 | 500.83 | 512.95 | OK | |
| r-release-linux-x86_64 | 0.12.0 | 8.10 | 514.56 | 522.66 | OK | |
| r-release-macos-arm64 | 1.0.0 | 176.00 | OK | |||
| r-release-macos-x86_64 | 1.0.0 | 375.00 | OK | |||
| r-release-windows-x86_64 | 1.0.0 | 12.00 | 283.00 | 295.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.0 | 9.00 | ERROR | |||
| r-oldrel-macos-x86_64 | 1.0.0 | 14.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.0.0 | 10.00 | 311.00 | 321.00 | OK |
Version: 0.12.0
Check: R code for possible problems
Result: NOTE
.__FSelectorDesignPoints__initialize: no visible binding for global
variable ‘OptimizerDesignPoints’
.__FSelector__optimize: no visible binding for global variable
‘ContextOptimization’
.__FSelector__optimize: no visible global function definition for
‘optimize_default’
Undefined global functions or variables:
ContextOptimization OptimizerDesignPoints optimize_default
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.12.0
Check: Rd cross-references
Result: WARN
Missing link or links in Rd file 'CallbackFSelect.Rd':
‘[bbotk:CallbackOptimization]{bbotk::CallbackOptimization}’
Missing link or links in Rd file 'callback_fselect.Rd':
‘[bbotk:ContextOptimization]{bbotk::ContextOptimization}’
‘ContextOptimization’
See section 'Cross-references' in the 'Writing R Extensions' manual.
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.12.0
Check: examples
Result: ERROR
Running examples in ‘mlr3fselect-Ex.R’ failed
The error most likely occurred in:
> ### Name: CallbackFSelect
> ### Title: Create Feature Selection Callback
> ### Aliases: CallbackFSelect
>
> ### ** Examples
>
> # Write archive to disk
> callback_fselect("mlr3fselect.backup",
+ on_optimization_end = function(callback, context) {
+ saveRDS(context$instance$archive, "archive.rds")
+ }
+ )
Error: 'CallbackOptimization' is not an exported object from 'namespace:bbotk'
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.12.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [132s/82s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> if (requireNamespace("testthat", quietly = TRUE)) {
+ library(testthat)
+ library(checkmate)
+ library(mlr3fselect)
+ test_check("mlr3fselect")
+ }
Loading required package: mlr3
Starting 2 test processes
[ FAIL 94 | WARN 0 | SKIP 3 | PASS 125 ]
══ Skipped tests (3) ═══════════════════════════════════════════════════════════
• On CRAN (3): 'test_AutoFSelector.R:2:3', 'test_AutoFSelector.R:29:3',
'test_AutoFSelector.R:64:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_ArchiveFSelect.R:2:3'): ArchiveFSelect access methods work ─────
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3fselect::fselect(...) at test_ArchiveFSelect.R:2:3
2. └─fselector$optimize(instance)
3. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_ArchiveFSelect.R:54:3'): ArchiveFSelect as.data.table function works ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3fselect::fselect(...) at test_ArchiveFSelect.R:54:3
2. └─fselector$optimize(instance)
3. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_ArchiveFSelect.R:159:3'): global ties method works ─────────────
Error in `.__FSelectorDesignPoints__initialize(self = self, private = private,
super = super)`: object 'OptimizerDesignPoints' not found
Backtrace:
▆
1. ├─mlr3fselect::fselect(...) at test_ArchiveFSelect.R:159:3
2. │ └─mlr3fselect:::assert_fselector(fselector)
3. │ └─checkmate::assert_r6(fselector, "FSelector")
4. │ └─checkmate::checkR6(...)
5. └─mlr3fselect::fs("design_points", design = design)
6. └─mlr3misc::dictionary_sugar_get(mlr_fselectors, .key, ...)
7. ├─checkmate::assert_r6(dictionary_initialize_item(.key, obj, dots[ii]))
8. │ └─checkmate::checkR6(...)
9. └─mlr3misc:::dictionary_initialize_item(.key, obj, dots[ii])
10. ├─base::do.call(constructor$new, cargs)
11. └─R6 (local) `<fn>`()
12. └─mlr3fselect (local) initialize(...)
13. └─mlr3fselect:::.__FSelectorDesignPoints__initialize(...)
14. └─super$initialize(optimizer = OptimizerDesignPoints$new(), man = "mlr3fselect::mlr_fselectors_design_points")
15. └─mlr3fselect:::.__FSelectorFromOptimizer__initialize(...)
16. └─bbotk::assert_optimizer(optimizer)
17. └─checkmate::assert_r6(optimizer, "Optimizer")
18. └─checkmate::checkR6(...)
── Error ('test_ArchiveFSelect.R:200:3'): local ties method works when maximize measure ──
Error in `.__FSelectorDesignPoints__initialize(self = self, private = private,
super = super)`: object 'OptimizerDesignPoints' not found
Backtrace:
▆
1. ├─mlr3fselect::fselect(...) at test_ArchiveFSelect.R:200:3
2. │ └─mlr3fselect:::assert_fselector(fselector)
3. │ └─checkmate::assert_r6(fselector, "FSelector")
4. │ └─checkmate::checkR6(...)
5. └─mlr3fselect::fs("design_points", design = design)
6. └─mlr3misc::dictionary_sugar_get(mlr_fselectors, .key, ...)
7. ├─checkmate::assert_r6(dictionary_initialize_item(.key, obj, dots[ii]))
8. │ └─checkmate::checkR6(...)
9. └─mlr3misc:::dictionary_initialize_item(.key, obj, dots[ii])
10. ├─base::do.call(constructor$new, cargs)
11. └─R6 (local) `<fn>`()
12. └─mlr3fselect (local) initialize(...)
13. └─mlr3fselect:::.__FSelectorDesignPoints__initialize(...)
14. └─super$initialize(optimizer = OptimizerDesignPoints$new(), man = "mlr3fselect::mlr_fselectors_design_points")
15. └─mlr3fselect:::.__FSelectorFromOptimizer__initialize(...)
16. └─bbotk::assert_optimizer(optimizer)
17. └─checkmate::assert_r6(optimizer, "Optimizer")
18. └─checkmate::checkR6(...)
── Error ('test_ArchiveFSelect.R:228:3'): local ties method works when minimize measure ──
Error in `.__FSelectorDesignPoints__initialize(self = self, private = private,
super = super)`: object 'OptimizerDesignPoints' not found
Backtrace:
▆
1. ├─mlr3fselect::fselect(...) at test_ArchiveFSelect.R:228:3
2. │ └─mlr3fselect:::assert_fselector(fselector)
3. │ └─checkmate::assert_r6(fselector, "FSelector")
4. │ └─checkmate::checkR6(...)
5. └─mlr3fselect::fs("design_points", design = design)
6. └─mlr3misc::dictionary_sugar_get(mlr_fselectors, .key, ...)
7. ├─checkmate::assert_r6(dictionary_initialize_item(.key, obj, dots[ii]))
8. │ └─checkmate::checkR6(...)
9. └─mlr3misc:::dictionary_initialize_item(.key, obj, dots[ii])
10. ├─base::do.call(constructor$new, cargs)
11. └─R6 (local) `<fn>`()
12. └─mlr3fselect (local) initialize(...)
13. └─mlr3fselect:::.__FSelectorDesignPoints__initialize(...)
14. └─super$initialize(optimizer = OptimizerDesignPoints$new(), man = "mlr3fselect::mlr_fselectors_design_points")
15. └─mlr3fselect:::.__FSelectorFromOptimizer__initialize(...)
16. └─bbotk::assert_optimizer(optimizer)
17. └─checkmate::assert_r6(optimizer, "Optimizer")
18. └─checkmate::checkR6(...)
── Error ('test_ArchiveFSelect.R:256:3'): local ties method works with batches ──
Error in `.__FSelectorDesignPoints__initialize(self = self, private = private,
super = super)`: object 'OptimizerDesignPoints' not found
Backtrace:
▆
1. ├─mlr3fselect::fselect(...) at test_ArchiveFSelect.R:256:3
2. │ └─mlr3fselect:::assert_fselector(fselector)
3. │ └─checkmate::assert_r6(fselector, "FSelector")
4. │ └─checkmate::checkR6(...)
5. └─mlr3fselect::fs("design_points", design = design, batch_size = 1)
6. └─mlr3misc::dictionary_sugar_get(mlr_fselectors, .key, ...)
7. ├─checkmate::assert_r6(dictionary_initialize_item(.key, obj, dots[ii]))
8. │ └─checkmate::checkR6(...)
9. └─mlr3misc:::dictionary_initialize_item(.key, obj, dots[ii])
10. ├─base::do.call(constructor$new, cargs)
11. └─R6 (local) `<fn>`()
12. └─mlr3fselect (local) initialize(...)
13. └─mlr3fselect:::.__FSelectorDesignPoints__initialize(...)
14. └─super$initialize(optimizer = OptimizerDesignPoints$new(), man = "mlr3fselect::mlr_fselectors_design_points")
15. └─mlr3fselect:::.__FSelectorFromOptimizer__initialize(...)
16. └─bbotk::assert_optimizer(optimizer)
17. └─checkmate::assert_r6(optimizer, "Optimizer")
18. └─checkmate::checkR6(...)
── Failure ('test_AutoFSelector.R:136:3'): AutoFSelector works with GraphLearner ──
exists("validate", lrn) is not TRUE
`actual`: FALSE
`expected`: TRUE
Backtrace:
▆
1. └─global expect_learner(at) at test_AutoFSelector.R:136:3
2. └─testthat::expect_true(exists("validate", lrn))
── Failure ('test_AutoFSelector.R:136:3'): AutoFSelector works with GraphLearner ──
exists("internal_valid_scores", envir = lrn) is not TRUE
`actual`: FALSE
`expected`: TRUE
Backtrace:
▆
1. └─global expect_learner(at) at test_AutoFSelector.R:136:3
2. └─testthat::expect_true(exists("internal_valid_scores", envir = lrn))
── Failure ('test_AutoFSelector.R:136:3'): AutoFSelector works with GraphLearner ──
Check on 'mlr3misc::get_private(lrn)$.extract_internal_valid_scores' failed: Must be a function, not 'NULL'
Backtrace:
▆
1. └─global expect_learner(at) at test_AutoFSelector.R:136:3
2. └─checkmate::expect_function(mlr3misc::get_private(lrn)$.extract_internal_valid_scores)
3. └─checkmate::makeExpectation(x, res, info, label)
── Error ('test_AutoFSelector.R:136:3'): AutoFSelector works with GraphLearner ──
Error: at least one parameter must support internal tuning when the learner is tagged as such
Backtrace:
▆
1. └─global expect_learner(at) at test_AutoFSelector.R:136:3
2. └─mlr3misc::stopf("at least one parameter must support internal tuning when the learner is tagged as such")
── Error ('test_AutoFSelector.R:166:3'): AutoFSelector get_base_learner method works ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─afs$train(tsk("pima")) at test_AutoFSelector.R:166:3
2. └─mlr3:::.__Learner__train(...)
3. └─mlr3:::learner_train(...)
4. └─mlr3misc::encapsulate(...)
5. ├─mlr3misc::invoke(...)
6. │ └─base::eval.parent(expr, n = 1L)
7. │ └─base::eval(expr, p)
8. │ └─base::eval(expr, p)
9. └─mlr3 (local) .f(learner = `<AtFSlctr>`, task = `<TskClssf>`)
10. └─get_private(learner)$.train(task)
11. └─mlr3fselect:::.__AutoFSelector__.train(...)
12. └─self$fselector$optimize(instance)
13. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_AutoFSelector.R:209:3'): AutoFSelector hash works #647 in mlr3 ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3::benchmark(grid, store_models = TRUE) at test_AutoFSelector.R:209:3
2. └─mlr3:::future_map(...)
3. └─future.apply::future_mapply(...)
4. └─future.apply:::future_xapply(...)
5. ├─future::value(fs)
6. └─future:::value.list(fs)
7. ├─future::resolve(...)
8. └─future:::resolve.list(...)
9. └─future (local) signalConditionsASAP(obj, resignal = FALSE, pos = ii)
10. └─future:::signalConditions(...)
── Error ('test_FSelectInstanceMultiCrit.R:4:3'): empty FSelectInstanceMultiCrit works ──
Error in ``$.R6`(inst$archive, data)`: R6 class ArchiveFSelect/Archive/R6 does not have slot 'data'!
Backtrace:
▆
1. ├─checkmate::expect_data_table(inst$archive$data, nrows = 0L) at test_FSelectInstanceMultiCrit.R:4:3
2. │ └─checkmate::checkDataTable(...)
3. ├─inst$archive$data
4. └─global `$.R6`(inst$archive, data)
── Error ('test_FSelectInstanceMultiCrit.R:16:3'): eval_batch works ────────────
Error in ``$.R6`(archive, "n_evals")`: R6 class ArchiveFSelect/Archive/R6 does not have slot 'n_evals'!
Backtrace:
▆
1. ├─inst$eval_batch(xdt) at test_FSelectInstanceMultiCrit.R:16:3
2. │ └─bbotk:::.__OptimInstanceBatch__eval_batch(...)
3. │ ├─self$is_terminated
4. │ └─global `$.R6`(self, "is_terminated")
5. │ └─base::get(name, envir = x)
6. └─bbotk (local) `<fn>`()
7. └─bbotk:::.__OptimInstanceBatch__is_terminated(...)
8. └─self$terminator$is_terminated(self$archive)
9. └─bbotk:::.__TerminatorEvals__is_terminated(...)
10. ├─archive$n_evals
11. └─global `$.R6`(archive, "n_evals")
── Error ('test_FSelectInstanceMultiCrit.R:29:3'): objective_function works ────
Error in ``$.R6`(archive, "n_evals")`: R6 class ArchiveFSelect/Archive/R6 does not have slot 'n_evals'!
Backtrace:
▆
1. ├─inst$objective_function(c(1, 1, 0, 0)) at test_FSelectInstanceMultiCrit.R:29:3
2. │ └─bbotk:::.__OptimInstanceBatch__objective_function(...)
3. │ └─private$.objective_function(x, self, self$objective_multiplicator)
4. │ └─inst$eval_batch(xdt)
5. │ └─bbotk:::.__OptimInstanceBatch__eval_batch(...)
6. │ ├─self$is_terminated
7. │ └─global `$.R6`(self, "is_terminated")
8. │ └─base::get(name, envir = x)
9. └─bbotk (local) `<fn>`()
10. └─bbotk:::.__OptimInstanceBatch__is_terminated(...)
11. └─self$terminator$is_terminated(self$archive)
12. └─bbotk:::.__TerminatorEvals__is_terminated(...)
13. ├─archive$n_evals
14. └─global `$.R6`(archive, "n_evals")
── Error ('test_FSelectInstanceMultiCrit.R:37:3'): store_benchmark_result flag works ──
Error in ``$.R6`(archive, "n_evals")`: R6 class ArchiveFSelect/Archive/R6 does not have slot 'n_evals'!
Backtrace:
▆
1. ├─inst$eval_batch(xdt) at test_FSelectInstanceMultiCrit.R:37:3
2. │ └─bbotk:::.__OptimInstanceBatch__eval_batch(...)
3. │ ├─self$is_terminated
4. │ └─global `$.R6`(self, "is_terminated")
5. │ └─base::get(name, envir = x)
6. └─bbotk (local) `<fn>`()
7. └─bbotk:::.__OptimInstanceBatch__is_terminated(...)
8. └─self$terminator$is_terminated(self$archive)
9. └─bbotk:::.__TerminatorEvals__is_terminated(...)
10. ├─archive$n_evals
11. └─global `$.R6`(archive, "n_evals")
── Error ('test_FSelectInstanceMultiCrit.R:54:3'): result$features works ───────
Error in ``$.R6`(self, "callbacks")`: R6 class FSelectInstanceMultiCrit/OptimInstanceMultiCrit/OptimInstanceBatchMultiCrit/OptimInstanceBatch/OptimInstance/R6 does not have slot 'callbacks'!
Backtrace:
▆
1. └─inst$assign_result(xdt, ydt) at test_FSelectInstanceMultiCrit.R:54:3
2. └─mlr3fselect:::.__FSelectInstanceMultiCrit__assign_result(...)
3. ├─mlr3misc::call_back("on_result", self$callbacks, private$.context)
4. ├─self$callbacks
5. └─global `$.R6`(self, "callbacks")
── Error ('test_FSelectorDesignPoints.R:8:3'): default parameters work ─────────
Error in `.__FSelectorDesignPoints__initialize(self = self, private = private,
super = super)`: object 'OptimizerDesignPoints' not found
Backtrace:
▆
1. └─global test_fselector("design_points", design = design) at test_FSelectorDesignPoints.R:8:3
2. └─mlr3fselect::fs(.key, ...)
3. └─mlr3misc::dictionary_sugar_get(mlr_fselectors, .key, ...)
4. ├─checkmate::assert_r6(dictionary_initialize_item(.key, obj, dots[ii]))
5. │ └─checkmate::checkR6(...)
6. └─mlr3misc:::dictionary_initialize_item(.key, obj, dots[ii])
7. ├─base::do.call(constructor$new, cargs)
8. └─R6 (local) `<fn>`()
9. └─mlr3fselect (local) initialize(...)
10. └─mlr3fselect:::.__FSelectorDesignPoints__initialize(...)
11. └─super$initialize(optimizer = OptimizerDesignPoints$new(), man = "mlr3fselect::mlr_fselectors_design_points")
12. └─mlr3fselect:::.__FSelectorFromOptimizer__initialize(...)
13. └─bbotk::assert_optimizer(optimizer)
14. └─checkmate::assert_r6(optimizer, "Optimizer")
15. └─checkmate::checkR6(...)
── Error ('test_FSelectorDesignPoints.R:20:3'): multi-crit works ───────────────
Error in `.__FSelectorDesignPoints__initialize(self = self, private = private,
super = super)`: object 'OptimizerDesignPoints' not found
Backtrace:
▆
1. └─global test_fselector_2D("design_points", design = design) at test_FSelectorDesignPoints.R:20:3
2. └─mlr3fselect::fs(.key, ...)
3. └─mlr3misc::dictionary_sugar_get(mlr_fselectors, .key, ...)
4. ├─checkmate::assert_r6(dictionary_initialize_item(.key, obj, dots[ii]))
5. │ └─checkmate::checkR6(...)
6. └─mlr3misc:::dictionary_initialize_item(.key, obj, dots[ii])
7. ├─base::do.call(constructor$new, cargs)
8. └─R6 (local) `<fn>`()
9. └─mlr3fselect (local) initialize(...)
10. └─mlr3fselect:::.__FSelectorDesignPoints__initialize(...)
11. └─super$initialize(optimizer = OptimizerDesignPoints$new(), man = "mlr3fselect::mlr_fselectors_design_points")
12. └─mlr3fselect:::.__FSelectorFromOptimizer__initialize(...)
13. └─bbotk::assert_optimizer(optimizer)
14. └─checkmate::assert_r6(optimizer, "Optimizer")
15. └─checkmate::checkR6(...)
── Error ('test_FSelectorExhaustiveSearch.R:2:3'): default parameters work ─────
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─global test_fselector("exhaustive_search") at test_FSelectorExhaustiveSearch.R:2:3
2. └─mlr3fselect::fselect(...)
3. └─fselector$optimize(instance)
4. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorExhaustiveSearch.R:14:3'): max_features parameter works ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─global test_fselector("exhaustive_search", max_features = 2) at test_FSelectorExhaustiveSearch.R:14:3
2. └─mlr3fselect::fselect(...)
3. └─fselector$optimize(instance)
4. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorExhaustiveSearch.R:23:3'): multi-crit works ───────────
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─global test_fselector_2D("exhaustive_search") at test_FSelectorExhaustiveSearch.R:23:3
2. └─mlr3fselect::fselect(...)
3. └─fselector$optimize(instance)
4. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorExhaustiveSearch.R:27:3'): batch_size parameter works ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─global test_fselector("exhaustive_search", batch_size = 2) at test_FSelectorExhaustiveSearch.R:27:3
2. └─mlr3fselect::fselect(...)
3. └─fselector$optimize(instance)
4. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectInstanceSingleCrit.R:4:3'): empty FSelectInstanceSingleCrit works ──
Error in ``$.R6`(inst$archive, data)`: R6 class ArchiveFSelect/Archive/R6 does not have slot 'data'!
Backtrace:
▆
1. ├─checkmate::expect_data_table(inst$archive$data, nrows = 0L) at test_FSelectInstanceSingleCrit.R:4:3
2. │ └─checkmate::checkDataTable(...)
3. ├─inst$archive$data
4. └─global `$.R6`(inst$archive, data)
── Error ('test_FSelectInstanceSingleCrit.R:16:3'): eval_batch works ───────────
Error in ``$.R6`(archive, "n_evals")`: R6 class ArchiveFSelect/Archive/R6 does not have slot 'n_evals'!
Backtrace:
▆
1. ├─inst$eval_batch(xdt) at test_FSelectInstanceSingleCrit.R:16:3
2. │ └─bbotk:::.__OptimInstanceBatch__eval_batch(...)
3. │ ├─self$is_terminated
4. │ └─global `$.R6`(self, "is_terminated")
5. │ └─base::get(name, envir = x)
6. └─bbotk (local) `<fn>`()
7. └─bbotk:::.__OptimInstanceBatch__is_terminated(...)
8. └─self$terminator$is_terminated(self$archive)
9. └─bbotk:::.__TerminatorEvals__is_terminated(...)
10. ├─archive$n_evals
11. └─global `$.R6`(archive, "n_evals")
── Error ('test_FSelectInstanceSingleCrit.R:40:3'): objective_function works ───
Error in ``$.R6`(archive, "n_evals")`: R6 class ArchiveFSelect/Archive/R6 does not have slot 'n_evals'!
Backtrace:
▆
1. ├─inst$objective_function(c(1, 1, 0, 0)) at test_FSelectInstanceSingleCrit.R:40:3
2. │ └─bbotk:::.__OptimInstanceBatch__objective_function(...)
3. │ └─private$.objective_function(x, self, self$objective_multiplicator)
4. │ └─inst$eval_batch(xdt)
5. │ └─bbotk:::.__OptimInstanceBatch__eval_batch(...)
6. │ ├─self$is_terminated
7. │ └─global `$.R6`(self, "is_terminated")
8. │ └─base::get(name, envir = x)
9. └─bbotk (local) `<fn>`()
10. └─bbotk:::.__OptimInstanceBatch__is_terminated(...)
11. └─self$terminator$is_terminated(self$archive)
12. └─bbotk:::.__TerminatorEvals__is_terminated(...)
13. ├─archive$n_evals
14. └─global `$.R6`(archive, "n_evals")
── Error ('test_FSelectInstanceSingleCrit.R:48:3'): store_benchmark_result flag works ──
Error in ``$.R6`(archive, "n_evals")`: R6 class ArchiveFSelect/Archive/R6 does not have slot 'n_evals'!
Backtrace:
▆
1. ├─inst$eval_batch(xdt) at test_FSelectInstanceSingleCrit.R:48:3
2. │ └─bbotk:::.__OptimInstanceBatch__eval_batch(...)
3. │ ├─self$is_terminated
4. │ └─global `$.R6`(self, "is_terminated")
5. │ └─base::get(name, envir = x)
6. └─bbotk (local) `<fn>`()
7. └─bbotk:::.__OptimInstanceBatch__is_terminated(...)
8. └─self$terminator$is_terminated(self$archive)
9. └─bbotk:::.__TerminatorEvals__is_terminated(...)
10. ├─archive$n_evals
11. └─global `$.R6`(archive, "n_evals")
── Error ('test_FSelectInstanceSingleCrit.R:66:3'): result$features works ──────
Error in ``$.R6`(self, "callbacks")`: R6 class FSelectInstanceSingleCrit/OptimInstanceSingleCrit/OptimInstanceBatchSingleCrit/OptimInstanceBatch/OptimInstance/R6 does not have slot 'callbacks'!
Backtrace:
▆
1. └─inst$assign_result(xdt, y) at test_FSelectInstanceSingleCrit.R:66:3
2. └─mlr3fselect:::.__FSelectInstanceSingleCrit__assign_result(...)
3. ├─mlr3misc::call_back("on_result", self$callbacks, private$.context)
4. ├─self$callbacks
5. └─global `$.R6`(self, "callbacks")
── Error ('test_FSelectInstanceSingleCrit.R:77:3'): always include variable works ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3fselect::fselect(...) at test_FSelectInstanceSingleCrit.R:77:3
2. └─fselector$optimize(instance)
3. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectInstanceSingleCrit.R:103:3'): always include variables works ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3fselect::fselect(...) at test_FSelectInstanceSingleCrit.R:103:3
2. └─fselector$optimize(instance)
3. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorGeneticSearch.R:4:3'): default parameters work ────────
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─global test_fselector("genetic_search", term_evals = 10) at test_FSelectorGeneticSearch.R:4:3
2. └─mlr3fselect::fselect(...)
3. └─fselector$optimize(instance)
4. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorRFECV.R:12:3'): extra columns are stored in the archive ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─optimizer$optimize(instance) at test_FSelectorRFECV.R:12:3
2. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorRFECV.R:32:3'): resampling is converted ───────────────
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─optimizer$optimize(instance) at test_FSelectorRFECV.R:32:3
2. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorRFECV.R:61:3'): default parameters work ───────────────
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─optimizer$optimize(instance) at test_FSelectorRFECV.R:61:3
2. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorRFECV.R:75:3'): learner without importance method throw an error ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. ├─testthat::expect_error(...) at test_FSelectorRFECV.R:75:3
2. │ └─testthat:::expect_condition_matching(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─mlr3fselect::fselect(...)
8. └─fselector$optimize(instance)
9. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorRFECV.R:118:3'): optimal features are selected ────────
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─optimizer$optimize(instance) at test_FSelectorRFECV.R:118:3
2. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorRandomSearch.R:2:3'): default parameters work ─────────
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─global test_fselector("random_search", batch_size = 5, term_evals = 10) at test_FSelectorRandomSearch.R:2:3
2. └─mlr3fselect::fselect(...)
3. └─fselector$optimize(instance)
4. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorRandomSearch.R:6:3'): max_features parameter work ─────
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─global test_fselector("random_search", max_features = 1, term_evals = 10) at test_FSelectorRandomSearch.R:6:3
2. └─mlr3fselect::fselect(...)
3. └─fselector$optimize(instance)
4. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorRandomSearch.R:12:3'): multi-crit works ───────────────
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─global test_fselector_2D("random_search", batch_size = 5, term_evals = 10) at test_FSelectorRandomSearch.R:12:3
2. └─mlr3fselect::fselect(...)
3. └─fselector$optimize(instance)
4. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorRFE.R:2:3'): importance is stored in the archive ──────
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─global test_fselector("rfe", store_models = TRUE) at test_FSelectorRFE.R:2:3
2. └─mlr3fselect::fselect(...)
3. └─fselector$optimize(instance)
4. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorRFE.R:11:3'): default parameters work ─────────────────
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─global test_fselector("rfe", store_models = TRUE) at test_FSelectorRFE.R:11:3
2. └─mlr3fselect::fselect(...)
3. └─fselector$optimize(instance)
4. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorRFE.R:18:3'): recursive parameter works ───────────────
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─global test_fselector("rfe", recursive = FALSE, store_models = TRUE) at test_FSelectorRFE.R:18:3
2. └─mlr3fselect::fselect(...)
3. └─fselector$optimize(instance)
4. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorRFE.R:27:3'): feature_fraction parameter works ────────
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─global test_fselector("rfe", feature_fraction = 0.9, store_models = TRUE) at test_FSelectorRFE.R:27:3
2. └─mlr3fselect::fselect(...)
3. └─fselector$optimize(instance)
4. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorRFE.R:49:3'): feature_number parameter works ──────────
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─global test_fselector("rfe", feature_number = 1, store_models = TRUE) at test_FSelectorRFE.R:49:3
2. └─mlr3fselect::fselect(...)
3. └─fselector$optimize(instance)
4. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorRFE.R:63:3'): subset_size parameter works ─────────────
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─global test_fselector("rfe", subset_sizes = c(3L, 1L), store_models = TRUE) at test_FSelectorRFE.R:63:3
2. └─mlr3fselect::fselect(...)
3. └─fselector$optimize(instance)
4. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorRFE.R:83:3'): subset is full feature set works ────────
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─global test_fselector("rfe", feature_number = 4, store_models = TRUE) at test_FSelectorRFE.R:83:3
2. └─mlr3fselect::fselect(...)
3. └─fselector$optimize(instance)
4. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorRFE.R:92:3'): learner without importance method throw an error ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. ├─testthat::expect_error(...) at test_FSelectorRFE.R:92:3
2. │ └─testthat:::expect_condition_matching(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─mlr3fselect::fselect(...)
8. └─fselector$optimize(instance)
9. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorRFE.R:154:3'): works without storing models ───────────
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3fselect::fselect(...) at test_FSelectorRFE.R:154:3
2. └─fselector$optimize(instance)
3. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorRFE.R:233:3'): optimal features are selected with rank ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─optimizer$optimize(instance) at test_FSelectorRFE.R:233:3
2. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorRFE.R:290:3'): optimal features are selected with mean ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─optimizer$optimize(instance) at test_FSelectorRFE.R:290:3
2. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorSequential.R:2:3'): default parameters works ──────────
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─global test_fselector("sequential") at test_FSelectorSequential.R:2:3
2. └─mlr3fselect::fselect(...)
3. └─fselector$optimize(instance)
4. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorSequential.R:11:3'): sbs strategy works ───────────────
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─global test_fselector("sequential", strategy = "sbs") at test_FSelectorSequential.R:11:3
2. └─mlr3fselect::fselect(...)
3. └─fselector$optimize(instance)
4. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorSequential.R:20:3'): sfs strategy works with max_features parameter ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─global test_fselector("sequential", max_features = 2) at test_FSelectorSequential.R:20:3
2. └─mlr3fselect::fselect(...)
3. └─fselector$optimize(instance)
4. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorSequential.R:26:3'): sbs strategy works with max_features parameter ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─global test_fselector("sequential", max_features = 2, strategy = "sbs") at test_FSelectorSequential.R:26:3
2. └─mlr3fselect::fselect(...)
3. └─fselector$optimize(instance)
4. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorSequential.R:32:3'): optimization_path method works ───
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─global test_fselector("sequential") at test_FSelectorSequential.R:32:3
2. └─mlr3fselect::fselect(...)
3. └─fselector$optimize(instance)
4. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorSequential.R:39:3'): optimization_path method works with included uhash ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─global test_fselector("sequential") at test_FSelectorSequential.R:39:3
2. └─mlr3fselect::fselect(...)
3. └─fselector$optimize(instance)
4. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorShadowVariableSearch.R:2:3'): default parameters work ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─global test_fselector("shadow_variable_search", store_models = TRUE) at test_FSelectorShadowVariableSearch.R:2:3
2. └─mlr3fselect::fselect(...)
3. └─fselector$optimize(instance)
4. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorShadowVariableSearch.R:14:3'): task is permuted ───────
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─fselector$optimize(instance) at test_FSelectorShadowVariableSearch.R:14:3
2. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorShadowVariableSearch.R:26:3'): first selected feature is a shadow variable works ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. ├─testthat::expect_error(fselector$optimize(instance), regexp = "The first selected feature is a shadow variable.") at test_FSelectorShadowVariableSearch.R:26:3
2. │ └─testthat:::expect_condition_matching(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─fselector$optimize(instance)
8. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorShadowVariableSearch.R:35:3'): second selected feature is a shadow variable works ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─fselector$optimize(instance) at test_FSelectorShadowVariableSearch.R:35:3
2. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_FSelectorShadowVariableSearch.R:54:3'): search is terminated by terminator works ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─fselector$optimize(instance) at test_FSelectorShadowVariableSearch.R:54:3
2. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_extract_inner_fselect_archives.R:2:3'): extract_inner_fselect_archives function works with resample and cv ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3fselect::fselect_nested(...) at test_extract_inner_fselect_archives.R:2:3
2. └─mlr3::resample(task, afs, outer_resampling, store_models = TRUE)
3. └─mlr3:::future_map(...)
4. └─future.apply::future_mapply(...)
5. └─future.apply:::future_xapply(...)
6. ├─future::value(fs)
7. └─future:::value.list(fs)
8. ├─future::resolve(...)
9. └─future:::resolve.list(...)
10. └─future (local) signalConditionsASAP(obj, resignal = FALSE, pos = ii)
11. └─future:::signalConditions(...)
── Error ('test_extract_inner_fselect_archives.R:11:3'): extract_inner_fselect_archives function works with resample and repeated cv ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3fselect::fselect_nested(...) at test_extract_inner_fselect_archives.R:11:3
2. └─mlr3::resample(task, afs, outer_resampling, store_models = TRUE)
3. └─mlr3:::future_map(...)
4. └─future.apply::future_mapply(...)
5. └─future.apply:::future_xapply(...)
6. ├─future::value(fs)
7. └─future:::value.list(fs)
8. ├─future::resolve(...)
9. └─future:::resolve.list(...)
10. └─future (local) signalConditionsASAP(obj, resignal = FALSE, pos = ii)
11. └─future:::signalConditions(...)
── Error ('test_extract_inner_fselect_archives.R:24:3'): extract_inner_fselect_archives function works with benchmark and cv ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3::benchmark(grid, store_models = TRUE) at test_extract_inner_fselect_archives.R:24:3
2. └─mlr3:::future_map(...)
3. └─future.apply::future_mapply(...)
4. └─future.apply:::future_xapply(...)
5. ├─future::value(fs)
6. └─future:::value.list(fs)
7. ├─future::resolve(...)
8. └─future:::resolve.list(...)
9. └─future (local) signalConditionsASAP(obj, resignal = FALSE, pos = ii)
10. └─future:::signalConditions(...)
── Error ('test_extract_inner_fselect_archives.R:37:3'): extract_inner_fselect_archives function works with benchmark and repeated cv ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3::benchmark(grid, store_models = TRUE) at test_extract_inner_fselect_archives.R:37:3
2. └─mlr3:::future_map(...)
3. └─future.apply::future_mapply(...)
4. └─future.apply:::future_xapply(...)
5. ├─future::value(fs)
6. └─future:::value.list(fs)
7. ├─future::resolve(...)
8. └─future:::resolve.list(...)
9. └─future (local) signalConditionsASAP(obj, resignal = FALSE, pos = ii)
10. └─future:::signalConditions(...)
── Error ('test_extract_inner_fselect_archives.R:50:3'): extract_inner_fselect_archives function works with multiple tasks ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3::benchmark(grid, store_models = TRUE) at test_extract_inner_fselect_archives.R:50:3
2. └─mlr3:::future_map(...)
3. └─future.apply::future_mapply(...)
4. └─future.apply:::future_xapply(...)
5. ├─future::value(fs)
6. └─future:::value.list(fs)
7. ├─future::resolve(...)
8. └─future:::resolve.list(...)
9. └─future (local) signalConditionsASAP(obj, resignal = FALSE, pos = ii)
10. └─future:::signalConditions(...)
── Error ('test_extract_inner_fselect_archives.R:61:3'): extract_inner_fselect_archives function works with no models ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3::resample(tsk("iris"), at, resampling_outer, store_models = FALSE) at test_extract_inner_fselect_archives.R:61:3
2. └─mlr3:::future_map(...)
3. └─future.apply::future_mapply(...)
4. └─future.apply:::future_xapply(...)
5. ├─future::value(fs)
6. └─future:::value.list(fs)
7. ├─future::resolve(...)
8. └─future:::resolve.list(...)
9. └─future (local) signalConditionsASAP(obj, resignal = FALSE, pos = ii)
10. └─future:::signalConditions(...)
── Error ('test_extract_inner_fselect_archives.R:70:3'): extract_inner_fselect_archives function works with no instance ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3::resample(tsk("iris"), at, resampling_outer, store_models = TRUE) at test_extract_inner_fselect_archives.R:70:3
2. └─mlr3:::future_map(...)
3. └─future.apply::future_mapply(...)
4. └─future.apply:::future_xapply(...)
5. ├─future::value(fs)
6. └─future:::value.list(fs)
7. ├─future::resolve(...)
8. └─future:::resolve.list(...)
9. └─future (local) signalConditionsASAP(obj, resignal = FALSE, pos = ii)
10. └─future:::signalConditions(...)
── Error ('test_extract_inner_fselect_archives.R:80:3'): extract_inner_fselect_archives function works with benchmark and no models ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3::benchmark(grid, store_models = FALSE) at test_extract_inner_fselect_archives.R:80:3
2. └─mlr3:::future_map(...)
3. └─future.apply::future_mapply(...)
4. └─future.apply:::future_xapply(...)
5. ├─future::value(fs)
6. └─future:::value.list(fs)
7. ├─future::resolve(...)
8. └─future:::resolve.list(...)
9. └─future (local) signalConditionsASAP(obj, resignal = FALSE, pos = ii)
10. └─future:::signalConditions(...)
── Error ('test_extract_inner_fselect_archives.R:92:3'): extract_inner_fselect_archives function works with mixed store instance ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3::benchmark(grid, store_models = TRUE) at test_extract_inner_fselect_archives.R:92:3
2. └─mlr3:::future_map(...)
3. └─future.apply::future_mapply(...)
4. └─future.apply:::future_xapply(...)
5. ├─future::value(fs)
6. └─future:::value.list(fs)
7. ├─future::resolve(...)
8. └─future:::resolve.list(...)
9. └─future (local) signalConditionsASAP(obj, resignal = FALSE, pos = ii)
10. └─future:::signalConditions(...)
── Error ('test_extract_inner_fselect_archives.R:104:3'): extract_inner_fselect_archives function works with autofselector and learner ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3::benchmark(grid, store_models = TRUE) at test_extract_inner_fselect_archives.R:104:3
2. └─mlr3:::future_map(...)
3. └─future.apply::future_mapply(...)
4. └─future.apply:::future_xapply(...)
5. ├─future::value(fs)
6. └─future:::value.list(fs)
7. ├─future::resolve(...)
8. └─future:::resolve.list(...)
9. └─future (local) signalConditionsASAP(obj, resignal = FALSE, pos = ii)
10. └─future:::signalConditions(...)
── Error ('test_fselect.R:2:3'): fselect function works with single measure ────
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3fselect::fselect(...) at test_fselect.R:2:3
2. └─fselector$optimize(instance)
3. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_fselect.R:11:3'): fselect function works with multiple measures ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3fselect::fselect(...) at test_fselect.R:11:3
2. └─fselector$optimize(instance)
3. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_fselect.R:20:3'): fselect function accepts string input for method ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3fselect::fselect(...) at test_fselect.R:20:3
2. └─fselector$optimize(instance)
3. └─mlr3fselect:::.__FSelector__optimize(...)
── Error ('test_extract_inner_fselect_result.R:2:3'): extract_inner_fselect_results function works with resample and cv ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3fselect::fselect_nested(...) at test_extract_inner_fselect_result.R:2:3
2. └─mlr3::resample(task, afs, outer_resampling, store_models = TRUE)
3. └─mlr3:::future_map(...)
4. └─future.apply::future_mapply(...)
5. └─future.apply:::future_xapply(...)
6. ├─future::value(fs)
7. └─future:::value.list(fs)
8. ├─future::resolve(...)
9. └─future:::resolve.list(...)
10. └─future (local) signalConditionsASAP(obj, resignal = FALSE, pos = ii)
11. └─future:::signalConditions(...)
── Error ('test_extract_inner_fselect_result.R:11:3'): extract_inner_fselect_results function works with resample and repeated cv ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3fselect::fselect_nested(...) at test_extract_inner_fselect_result.R:11:3
2. └─mlr3::resample(task, afs, outer_resampling, store_models = TRUE)
3. └─mlr3:::future_map(...)
4. └─future.apply::future_mapply(...)
5. └─future.apply:::future_xapply(...)
6. ├─future::value(fs)
7. └─future:::value.list(fs)
8. ├─future::resolve(...)
9. └─future:::resolve.list(...)
10. └─future (local) signalConditionsASAP(obj, resignal = FALSE, pos = ii)
11. └─future:::signalConditions(...)
── Error ('test_extract_inner_fselect_result.R:24:3'): extract_inner_fselect_results function works with benchmark and cv ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3::benchmark(grid, store_models = TRUE) at test_extract_inner_fselect_result.R:24:3
2. └─mlr3:::future_map(...)
3. └─future.apply::future_mapply(...)
4. └─future.apply:::future_xapply(...)
5. ├─future::value(fs)
6. └─future:::value.list(fs)
7. ├─future::resolve(...)
8. └─future:::resolve.list(...)
9. └─future (local) signalConditionsASAP(obj, resignal = FALSE, pos = ii)
10. └─future:::signalConditions(...)
── Error ('test_extract_inner_fselect_result.R:37:3'): extract_inner_fselect_results function works with benchmark and repeated cv ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3::benchmark(grid, store_models = TRUE) at test_extract_inner_fselect_result.R:37:3
2. └─mlr3:::future_map(...)
3. └─future.apply::future_mapply(...)
4. └─future.apply:::future_xapply(...)
5. ├─future::value(fs)
6. └─future:::value.list(fs)
7. ├─future::resolve(...)
8. └─future:::resolve.list(...)
9. └─future (local) signalConditionsASAP(obj, resignal = FALSE, pos = ii)
10. └─future:::signalConditions(...)
── Error ('test_extract_inner_fselect_result.R:50:3'): extract_inner_fselect_results function works with multiple tasks ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3::benchmark(grid, store_models = TRUE) at test_extract_inner_fselect_result.R:50:3
2. └─mlr3:::future_map(...)
3. └─future.apply::future_mapply(...)
4. └─future.apply:::future_xapply(...)
5. ├─future::value(fs)
6. └─future:::value.list(fs)
7. ├─future::resolve(...)
8. └─future:::resolve.list(...)
9. └─future (local) signalConditionsASAP(obj, resignal = FALSE, pos = ii)
10. └─future:::signalConditions(...)
── Error ('test_extract_inner_fselect_result.R:61:3'): extract_inner_fselect_results function works with no model ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3::resample(tsk("iris"), at, resampling_outer, store_models = FALSE) at test_extract_inner_fselect_result.R:61:3
2. └─mlr3:::future_map(...)
3. └─future.apply::future_mapply(...)
4. └─future.apply:::future_xapply(...)
5. ├─future::value(fs)
6. └─future:::value.list(fs)
7. ├─future::resolve(...)
8. └─future:::resolve.list(...)
9. └─future (local) signalConditionsASAP(obj, resignal = FALSE, pos = ii)
10. └─future:::signalConditions(...)
── Error ('test_extract_inner_fselect_result.R:70:3'): extract_inner_fselect_results function works no instance ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3::resample(tsk("iris"), at, resampling_outer, store_models = TRUE) at test_extract_inner_fselect_result.R:70:3
2. └─mlr3:::future_map(...)
3. └─future.apply::future_mapply(...)
4. └─future.apply:::future_xapply(...)
5. ├─future::value(fs)
6. └─future:::value.list(fs)
7. ├─future::resolve(...)
8. └─future:::resolve.list(...)
9. └─future (local) signalConditionsASAP(obj, resignal = FALSE, pos = ii)
10. └─future:::signalConditions(...)
── Error ('test_extract_inner_fselect_result.R:80:3'): extract_inner_fselect_results function works with benchmark and no models ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3::benchmark(grid, store_models = FALSE) at test_extract_inner_fselect_result.R:80:3
2. └─mlr3:::future_map(...)
3. └─future.apply::future_mapply(...)
4. └─future.apply:::future_xapply(...)
5. ├─future::value(fs)
6. └─future:::value.list(fs)
7. ├─future::resolve(...)
8. └─future:::resolve.list(...)
9. └─future (local) signalConditionsASAP(obj, resignal = FALSE, pos = ii)
10. └─future:::signalConditions(...)
── Error ('test_extract_inner_fselect_result.R:92:3'): extract_inner_fselect_results function works with mixed store instance ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3::benchmark(grid, store_models = TRUE) at test_extract_inner_fselect_result.R:92:3
2. └─mlr3:::future_map(...)
3. └─future.apply::future_mapply(...)
4. └─future.apply:::future_xapply(...)
5. ├─future::value(fs)
6. └─future:::value.list(fs)
7. ├─future::resolve(...)
8. └─future:::resolve.list(...)
9. └─future (local) signalConditionsASAP(obj, resignal = FALSE, pos = ii)
10. └─future:::signalConditions(...)
── Error ('test_extract_inner_fselect_result.R:104:3'): extract_inner_fselect_results function works with learner and autotuner ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3::benchmark(grid, store_models = TRUE) at test_extract_inner_fselect_result.R:104:3
2. └─mlr3:::future_map(...)
3. └─future.apply::future_mapply(...)
4. └─future.apply:::future_xapply(...)
5. ├─future::value(fs)
6. └─future:::value.list(fs)
7. ├─future::resolve(...)
8. └─future:::resolve.list(...)
9. └─future (local) signalConditionsASAP(obj, resignal = FALSE, pos = ii)
10. └─future:::signalConditions(...)
── Error ('test_extract_inner_fselect_result.R:113:3'): extract_inner_fselect_results function works with resample and return of instance ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3fselect::fselect_nested(...) at test_extract_inner_fselect_result.R:113:3
2. └─mlr3::resample(task, afs, outer_resampling, store_models = TRUE)
3. └─mlr3:::future_map(...)
4. └─future.apply::future_mapply(...)
5. └─future.apply:::future_xapply(...)
6. ├─future::value(fs)
7. └─future:::value.list(fs)
8. ├─future::resolve(...)
9. └─future:::resolve.list(...)
10. └─future (local) signalConditionsASAP(obj, resignal = FALSE, pos = ii)
11. └─future:::signalConditions(...)
── Error ('test_extract_inner_fselect_result.R:125:3'): extract_inner_fselect_results function works with benchmark and return of instance ──
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3::benchmark(grid, store_models = TRUE) at test_extract_inner_fselect_result.R:125:3
2. └─mlr3:::future_map(...)
3. └─future.apply::future_mapply(...)
4. └─future.apply:::future_xapply(...)
5. ├─future::value(fs)
6. └─future:::value.list(fs)
7. ├─future::resolve(...)
8. └─future:::resolve.list(...)
9. └─future (local) signalConditionsASAP(obj, resignal = FALSE, pos = ii)
10. └─future:::signalConditions(...)
── Error ('test_fselect_nested.R:2:3'): fselect_nested function works ──────────
Error in `.__FSelector__optimize(self = self, private = private, super = super,
inst = inst)`: object 'ContextOptimization' not found
Backtrace:
▆
1. └─mlr3fselect::fselect_nested(...) at test_fselect_nested.R:2:3
2. └─mlr3::resample(task, afs, outer_resampling, store_models = TRUE)
3. └─mlr3:::future_map(...)
4. └─future.apply::future_mapply(...)
5. └─future.apply:::future_xapply(...)
6. ├─future::value(fs)
7. └─future:::value.list(fs)
8. ├─future::resolve(...)
9. └─future:::resolve.list(...)
10. └─future (local) signalConditionsASAP(obj, resignal = FALSE, pos = ii)
11. └─future:::signalConditions(...)
── Error ('test_mlr_callbacks.R:4:3'): backup callback works ───────────────────
Error: 'CallbackOptimization' is not an exported object from 'namespace:bbotk'
Backtrace:
▆
1. ├─mlr3fselect::fselect(...) at test_mlr_callbacks.R:4:3
2. │ └─FSelectInstanceSingleCrit$new(...)
3. │ └─mlr3fselect (local) initialize(...)
4. │ └─mlr3fselect:::.__FSelectInstanceSingleCrit__initialize(...)
5. │ └─ObjectiveFSelect$new(...)
6. │ └─mlr3fselect (local) initialize(...)
7. │ └─mlr3fselect:::.__ObjectiveFSelect__initialize(...)
8. │ ├─mlr3misc::assert_callbacks(as_callbacks(callbacks))
9. │ │ └─base::lapply(callbacks, assert_callback)
10. │ └─mlr3misc::as_callbacks(callbacks)
11. └─mlr3misc::clbk("mlr3fselect.backup", path = file)
12. └─mlr3misc::dictionary_sugar_get(mlr_callbacks, .key)
13. └─mlr3misc:::dictionary_get(dict, .key)
14. └─mlr3misc:::dictionary_initialize_item(key, obj, dots)
15. ├─base::do.call(constructor, cargs)
16. └─mlr3fselect (local) `<fn>`()
17. └─mlr3fselect::callback_fselect(...)
18. └─CallbackFSelect$new(id, label, man)
19. └─R6 (local) get_inherit()
20. └─base::eval(inherit, parent_env, NULL)
21. └─base::eval(inherit, parent_env, NULL)
── Error ('test_mlr_callbacks.R:23:3'): svm_rfe callbacks works ────────────────
Error: 'CallbackOptimization' is not an exported object from 'namespace:bbotk'
Backtrace:
▆
1. ├─mlr3fselect::fselect(...) at test_mlr_callbacks.R:23:3
2. │ └─FSelectInstanceSingleCrit$new(...)
3. │ └─mlr3fselect (local) initialize(...)
4. │ └─mlr3fselect:::.__FSelectInstanceSingleCrit__initialize(...)
5. │ └─ObjectiveFSelect$new(...)
6. │ └─mlr3fselect (local) initialize(...)
7. │ └─mlr3fselect:::.__ObjectiveFSelect__initialize(...)
8. │ ├─mlr3misc::assert_callbacks(as_callbacks(callbacks))
9. │ │ └─base::lapply(callbacks, assert_callback)
10. │ └─mlr3misc::as_callbacks(callbacks)
11. └─mlr3misc::clbk("mlr3fselect.svm_rfe")
12. └─mlr3misc::dictionary_sugar_get(mlr_callbacks, .key)
13. └─mlr3misc:::dictionary_get(dict, .key)
14. └─mlr3misc:::dictionary_initialize_item(key, obj, dots)
15. ├─base::do.call(constructor, cargs)
16. └─mlr3fselect (local) `<fn>`()
17. └─mlr3fselect::callback_fselect(...)
18. └─CallbackFSelect$new(id, label, man)
19. └─R6 (local) get_inherit()
20. └─base::eval(inherit, parent_env, NULL)
21. └─base::eval(inherit, parent_env, NULL)
── Error ('test_mlr_callbacks.R:46:3'): one_se_rule callback works ─────────────
Error: 'CallbackOptimization' is not an exported object from 'namespace:bbotk'
Backtrace:
▆
1. ├─mlr3fselect::fselect(...) at test_mlr_callbacks.R:46:3
2. │ └─FSelectInstanceSingleCrit$new(...)
3. │ └─mlr3fselect (local) initialize(...)
4. │ └─mlr3fselect:::.__FSelectInstanceSingleCrit__initialize(...)
5. │ └─ObjectiveFSelect$new(...)
6. │ └─mlr3fselect (local) initialize(...)
7. │ └─mlr3fselect:::.__ObjectiveFSelect__initialize(...)
8. │ ├─mlr3misc::assert_callbacks(as_callbacks(callbacks))
9. │ │ └─base::lapply(callbacks, assert_callback)
10. │ └─mlr3misc::as_callbacks(callbacks)
11. └─mlr3misc::clbk("mlr3fselect.one_se_rule")
12. └─mlr3misc::dictionary_sugar_get(mlr_callbacks, .key)
13. └─mlr3misc:::dictionary_get(dict, .key)
14. └─mlr3misc:::dictionary_initialize_item(key, obj, dots)
15. ├─base::do.call(constructor, cargs)
16. └─mlr3fselect (local) `<fn>`()
17. └─mlr3fselect::callback_fselect(...)
18. └─CallbackFSelect$new(id, label, man)
19. └─R6 (local) get_inherit()
20. └─base::eval(inherit, parent_env, NULL)
21. └─base::eval(inherit, parent_env, NULL)
── Error ('test_fsi.R:35:5'): fsi and FSelectInstanceSingleCrit are equal ──────
Error: 'CallbackOptimization' is not an exported object from 'namespace:bbotk'
Backtrace:
▆
1. └─mlr3misc::clbk("mlr3fselect.backup") at test_fsi.R:35:5
2. └─mlr3misc::dictionary_sugar_get(mlr_callbacks, .key)
3. └─mlr3misc:::dictionary_get(dict, .key)
4. └─mlr3misc:::dictionary_initialize_item(key, obj, dots)
5. ├─base::do.call(constructor, cargs)
6. └─mlr3fselect (local) `<fn>`()
7. └─mlr3fselect::callback_fselect(...)
8. └─CallbackFSelect$new(id, label, man)
9. └─R6 (local) get_inherit()
10. └─base::eval(inherit, parent_env, NULL)
11. └─base::eval(inherit, parent_env, NULL)
── Error ('test_fsi.R:58:5'): fsi and FSelectInstanceMultiCrit are equal ───────
Error: 'CallbackOptimization' is not an exported object from 'namespace:bbotk'
Backtrace:
▆
1. └─mlr3misc::clbk("mlr3fselect.backup") at test_fsi.R:58:5
2. └─mlr3misc::dictionary_sugar_get(mlr_callbacks, .key)
3. └─mlr3misc:::dictionary_get(dict, .key)
4. └─mlr3misc:::dictionary_initialize_item(key, obj, dots)
5. ├─base::do.call(constructor, cargs)
6. └─mlr3fselect (local) `<fn>`()
7. └─mlr3fselect::callback_fselect(...)
8. └─CallbackFSelect$new(id, label, man)
9. └─R6 (local) get_inherit()
10. └─base::eval(inherit, parent_env, NULL)
11. └─base::eval(inherit, parent_env, NULL)
── Error ('test_mlr_fselectors.R:2:3'): mlr_fselectors ─────────────────────────
Error in `.__FSelectorDesignPoints__initialize(self = self, private = private,
super = super)`: object 'OptimizerDesignPoints' not found
Backtrace:
▆
1. └─global expect_dictionary(mlr_fselectors, min_items = 1L) at test_mlr_fselectors.R:2:3
2. ├─checkmate::expect_data_table(...)
3. │ └─checkmate::checkDataTable(...)
4. ├─data.table::as.data.table(d)
5. └─mlr3fselect:::as.data.table.DictionaryFSelector(d)
6. ├─data.table::setkeyv(...)
7. │ └─data.table::is.data.table(x)
8. └─mlr3misc::map_dtr(...)
9. ├─data.table::rbindlist(...)
10. ├─base::unname(map(.x, .f, ...))
11. └─mlr3misc::map(.x, .f, ...)
12. └─base::lapply(.x, .f, ...)
13. └─mlr3fselect (local) FUN(X[[i]], ...)
14. ├─base::withCallingHandlers(x$get(key), packageNotFoundWarning = function(w) invokeRestart("muffleWarning"))
15. └─x$get(key)
16. ├─mlr3misc::invoke(dictionary_get, self = self, key = key, .args = args)
17. │ └─base::eval.parent(expr, n = 1L)
18. │ └─base::eval(expr, p)
19. │ └─base::eval(expr, p)
20. └─mlr3misc:::dictionary_get(self = self, key = key)
21. └─mlr3misc:::dictionary_initialize_item(key, obj, dots)
22. ├─base::do.call(constructor$new, cargs)
23. └─R6 (local) `<fn>`()
24. └─mlr3fselect (local) initialize(...)
25. └─mlr3fselect:::.__FSelectorDesignPoints__initialize(...)
26. └─super$initialize(optimizer = OptimizerDesignPoints$new(), man = "mlr3fselect::mlr_fselectors_design_points")
27. └─mlr3fselect:::.__FSelectorFromOptimizer__initialize(...)
28. └─bbotk::assert_optimizer(optimizer)
29. └─checkmate::assert_r6(optimizer, "Optimizer")
30. └─checkmate::checkR6(...)
── Error ('test_mlr_fselectors.R:17:3'): as.data.table objects parameter ───────
Error in `.__FSelectorDesignPoints__initialize(self = self, private = private,
super = super)`: object 'OptimizerDesignPoints' not found
Backtrace:
▆
1. ├─data.table::as.data.table(mlr_fselectors, objects = TRUE) at test_mlr_fselectors.R:17:3
2. └─mlr3fselect:::as.data.table.DictionaryFSelector(...)
3. ├─data.table::setkeyv(...)
4. │ └─data.table::is.data.table(x)
5. └─mlr3misc::map_dtr(...)
6. ├─data.table::rbindlist(...)
7. ├─base::unname(map(.x, .f, ...))
8. └─mlr3misc::map(.x, .f, ...)
9. └─base::lapply(.x, .f, ...)
10. └─mlr3fselect (local) FUN(X[[i]], ...)
11. ├─base::withCallingHandlers(x$get(key), packageNotFoundWarning = function(w) invokeRestart("muffleWarning"))
12. └─x$get(key)
13. ├─mlr3misc::invoke(dictionary_get, self = self, key = key, .args = args)
14. │ └─base::eval.parent(expr, n = 1L)
15. │ └─base::eval(expr, p)
16. │ └─base::eval(expr, p)
17. └─mlr3misc:::dictionary_get(self = self, key = key)
18. └─mlr3misc:::dictionary_initialize_item(key, obj, dots)
19. ├─base::do.call(constructor$new, cargs)
20. └─R6 (local) `<fn>`()
21. └─mlr3fselect (local) initialize(...)
22. └─mlr3fselect:::.__FSelectorDesignPoints__initialize(...)
23. └─super$initialize(optimizer = OptimizerDesignPoints$new(), man = "mlr3fselect::mlr_fselectors_design_points")
24. └─mlr3fselect:::.__FSelectorFromOptimizer__initialize(...)
25. └─bbotk::assert_optimizer(optimizer)
26. └─checkmate::assert_r6(optimizer, "Optimizer")
27. └─checkmate::checkR6(...)
[ FAIL 94 | WARN 0 | SKIP 3 | PASS 125 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 1.0.0
Check: package dependencies
Result: ERROR
Packages required and available but unsuitable versions: 'bbotk', 'paradox'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64